The detailed information of tRNA gene sequence


Sequence ID>WENV170976554
Genome IDMTKZ01009258
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 961
End posion on genome 868
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tccgccatcc
tRNA gene sequence 
GGAGAGTTACCGAAGTGGTCGTAACGGGATCGACTCGAAATCGATTTAGGGGCCACAAGC
TCCTACGGGGGTTCGAATCCCCCACTCTCCGCCA
Downstream region at tRNA end position 
ttcatcttaa
Secondary structure (Cloverleaf model)
>WENV170976554	Ser	CGA
                   c      GCCA ttcatcttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C C C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G G G G G     C
  T           | | |                 T T
  C         A C G G
    G T A          G     TTAGGGGCCACAAGCTCCTAC
                    A - T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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