The detailed information of tRNA gene sequence


Sequence ID>WENV170976566
Genome IDMTKZ01009327
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 24147
End posion on genome 24237
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagcacaaat
tRNA gene sequence 
GGAGAGATGGTCGAGTTGGTTGAAGGCACCAGTCTTGAAAACTGGCGAAGGTTTGCGCTT
TCCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tataccactt
Secondary structure (Cloverleaf model)
>WENV170976566	Ser	TGA
                   t      GCCA tataccactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G C T G       G T G G G     C
  G           | + |                 T T
  T         A G G C
    T G A          A     CGAAGGTTTGCGCTTTCC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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