The detailed information of tRNA gene sequence


Sequence ID>WENV170976570
Genome IDMTKZ01009372
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2598
End posion on genome 2691
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
nnttttttgg
tRNA gene sequence 
GGAGGTGGCTGGGGCCCGGTGGCTCCCGCGGTCTTCAAAACCGTTGTGCCGCTTCACGGC
GGCGGGTGGGTTCGACTCCCATGCACCTCCGCCA
Downstream region at tRNA end position 
tttttctgtt
Secondary structure (Cloverleaf model)
>WENV170976570	SeC(p)	TCA
                   g      GCCA tttttctgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     G   G          T C
                    C     T A C C C     A
      C C C        T      + | | | |     G
    G       G G G G       G T G G G     C
    G       | + | |                 T T
    T       C T C C
      G G          C     TGTGCCGCTTCACGGCGGCGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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