The detailed information of tRNA gene sequence


Sequence ID>WENV170976572
Genome IDMTKZ01009393
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 17621
End posion on genome 17695
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acatttgcac
tRNA gene sequence 
CGCGAAGTAGAGCAGCGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGGAGTTCGATCC
TCCCCTTCGCAACAA
Downstream region at tRNA end position 
atggaaaggc
Secondary structure (Cloverleaf model)
>WENV170976572	Met	CAT
                   c      ACAA atggaaaggc
                     C   A
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          C T
                    T     C C C T C     A
        G A        A      | | | | |     G
      C     C G A G       G G G A G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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