The detailed information of tRNA gene sequence


Sequence ID>WENV170976599
Genome IDMTKZ01009710
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1382
End posion on genome 1292
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttaaatgcac
tRNA gene sequence 
GGAGAGATGCCAGAGCGGTTGAATGGGACGGTCTCGAAAACCGTTGTAGTCCTAGTGGCT
ACCGTGGGTTCGAATCCCACTCTCTCCGCCT
Downstream region at tRNA end position 
gattaaatta
Secondary structure (Cloverleaf model)
>WENV170976599	Ser	CGA
                   c      GCCT gattaaatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     TGTAGTCCTAGTGGCTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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