The detailed information of tRNA gene sequence


Sequence ID>WENV170976647
Genome IDMTKZ01010233
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 10793
End posion on genome 10882
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tggcgttcgt
tRNA gene sequence 
GGAGTAATACCCAAGTGGTGAAGGGGCTTCCCTGCTAAGGAAGTAGATCGGGCAACTGGT
GCGAGGGTTCGACTCCCTCTTACTCCGCCA
Downstream region at tRNA end position 
tcaagtcacg
Secondary structure (Cloverleaf model)
>WENV170976647	Ser	GCT
                   t      GCCA tcaagtcacg
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     A - T          T C
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A C C C       G A G G G     C
    G         | | |                 T T
    T       A G G G
      G A          G     TAGATCGGGCAACTGGTGC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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