The detailed information of tRNA gene sequence


Sequence ID>WENV170976659
Genome IDMTKZ01010417
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1598
End posion on genome 1671
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caatatgctc
tRNA gene sequence 
GGTGGGATAGCTCAGTCGGTTAGAGCATGGGATTCATAAACCCAAGGTCGGTGGTTCGAT
TCCACTTCCCACCAtac
Downstream region at tRNA end position 
attttttgtg
Secondary structure (Cloverleaf model)
>WENV170976659	Met	CAT
                   c      Atac attttttgtg
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T T
                    T     T C A C C     A
      T G A        A      + | | | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T - A
                    G - C
                    G - C
                    G - C
                    A   A
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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