The detailed information of tRNA gene sequence


Sequence ID>WENV170976663
Genome IDMTKZ01010504
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4927
End posion on genome 5016
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccgtcgattc
tRNA gene sequence 
GGAGAGGTCGCATAGTCCGGTCTAGTGCGCACGATTGGAAATCGTGTACCTCGCAAGGGG
TCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
actgagcagt
Secondary structure (Cloverleaf model)
>WENV170976663	Ser	GGA
                   c      GCCA actgagcagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C T G A        C      | | | | |     G
  C         T A C G       G C G G G     C
  G         + | | |                 T T
  G         G T G C
    T C T A        G     TACCTCGCAAGGGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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