The detailed information of tRNA gene sequence


Sequence ID>WENV170976679
Genome IDMTKZ01010673
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3544
End posion on genome 3630
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tcgcgcccgt
tRNA gene sequence 
GCCGGAGTGGTGAAACTGGTAGACGCAGGGGACTCAAAATCCCCCGCTCGCAAGGGCATC
TCGGTTCGATTCCGAGCTCCGGCACCA
Downstream region at tRNA end position 
atccatttca
Secondary structure (Cloverleaf model)
>WENV170976679	Leu	CAA
                   t      ACCA atccatttca
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     G A G C C     A
      C A A        G      | | | | |     G
    T       A G T G       C T C G G     C
    G         | + |                 T T
    G       A C G C
      T A G        A     CGCTCGCAAGGGCAT
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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