The detailed information of tRNA gene sequence


Sequence ID>WENV170976690
Genome IDMTKZ01010876
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1185
End posion on genome 1096
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgcctgccgc
tRNA gene sequence 
GGAGGAGTGGCCGAGTGGTCTATGGCGACGGTCTTGAAAACCGTTGTCCCTTTACGGGGA
CCGTGGGTTCGAATCCTACCTCCTCCGCCA
Downstream region at tRNA end position 
atcctatcta
Secondary structure (Cloverleaf model)
>WENV170976690	Ser	TGA
                   c      GCCA atcctatcta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G       + | | |                 T T
    T       T G G C
      C T A        G     TGTCCCTTTACGGGGACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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