The detailed information of tRNA gene sequence


Sequence ID>WENV170976701
Genome IDMTKZ01010963
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 14955
End posion on genome 14868
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaaaaacac
tRNA gene sequence 
GGAGGCTTATTCTAATTGGTAAGGAGCTGGTTTGCTAAACCAGTGGGGCTAATCACCCTT
GCAGGTTCAAGTCCTGTAGCCTCCGCCA
Downstream region at tRNA end position 
aaatattttt
Secondary structure (Cloverleaf model)
>WENV170976701	Ser	GCT
                   c      GCCA aaatattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A          T G
                    T     T G T C C     A
      T A A        A      + | | | |     A
    T       T C T T       G C A G G     C
    G       | | + |                 T T
    G       A G G A
      T A          G     TGGGGCTAATCACCCTT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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