The detailed information of tRNA gene sequence


Sequence ID>WENV170976711
Genome IDMTKZ01011102
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2222
End posion on genome 2150
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgtttcggcc
tRNA gene sequence 
GGGGCTGTAGCTCAATGGGAAGAGCGCCGGTTTTGCACGCCGGAGGTCGCCGGTTCGAGC
CCGGTCAGCTCCAttg
Downstream region at tRNA end position 
aaaaaaattt
Secondary structure (Cloverleaf model)
>WENV170976711	Ala	TGC
                   c      Attg aaaaaaattt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C G
                    T     T G G C C     A
      T A A        A      + | | | |     G
    G       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T + G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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