The detailed information of tRNA gene sequence


Sequence ID>WENV170976715
Genome IDMTKZ01011154
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 7772
End posion on genome 7859
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggagggggat
tRNA gene sequence 
GGAAGGATCGCATAGTGGTCGAGTGCGCTCGCTTGGAAAGCGAGTAGGCCCACAAGCCTC
CGGGGTTCGAATCCCCGTCCTTCCGCTA
Downstream region at tRNA end position 
tttatctata
Secondary structure (Cloverleaf model)
>WENV170976715	Ser	GGA
                   t      GCTA tttatctata
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     G C C C C     A
      T G A        C      | | | | |     G
    G       T A C G       C G G G G     C
    G       + | | |                 T T
    T       G T G C
      C G A        G     TAGGCCCACAAGCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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