The detailed information of tRNA gene sequence


Sequence ID>WENV170976729
Genome IDMTKZ01011315
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5322
End posion on genome 5397
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gccttgctgc
tRNA gene sequence 
GGTCCCATCGTCTAGAGGTCTAGGACGGGTGGTTCTCAGCCATCAAACCGGGGTTCGATT
CCCCGTGGGACCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170976729	Glu	CTC
                   c      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        G     AAAC
                    G - C
                    G + T
                    T - A
                    G - C
                    G - C
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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