The detailed information of tRNA gene sequence


Sequence ID>WENV170976732
Genome IDMTKZ01011351
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4604
End posion on genome 4530
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaacgtgtgg
tRNA gene sequence 
GGGCCCGTAGCTCAGTGGCAGAGCAGGCGGCTCATAACCGCTTGGTTGAAGGTTCGAATC
CTTCCGGGCCCACTA
Downstream region at tRNA end position 
acaaaaacgc
Secondary structure (Cloverleaf model)
>WENV170976732	Met	CAT
                   g      ACTA acaaaaacgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T T C C     A
        G A        A      | | | | |     G
      T     C T C G       G A A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     TGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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