The detailed information of tRNA gene sequence


Sequence ID>WENV170976735
Genome IDMTKZ01011384
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2978
End posion on genome 2902
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atcgagacat
tRNA gene sequence 
GGGCGCGTAGCTCAGCTGGTTAGAGCGCACGGTTCACATCCGTGAGGTCAGGGGTTCGAG
TCCCTTCGCGCCCACCT
Downstream region at tRNA end position 
ttgtctgccc
Secondary structure (Cloverleaf model)
>WENV170976735	Val	CAC
                   t      ACCT ttgtctgccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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