The detailed information of tRNA gene sequence


Sequence ID>WENV170976750
Genome IDMTKZ01011640
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 270
End posion on genome 359
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agcaagaaat
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTTGAACGGGGCGGTCTCGAAAACCGTTGTAGTCTTTTGACTA
CCGTGGGTTCGAATCCCACCTTCTCCGCAA
Downstream region at tRNA end position 
aagagctgag
Secondary structure (Cloverleaf model)
>WENV170976750	Ser	CGA
                   t      GCAA aagagctgag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGTAGTCTTTTGACTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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