The detailed information of tRNA gene sequence


Sequence ID>WENV170976765
Genome IDMTKZ01011912
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 9164
End posion on genome 9088
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttaattttct
tRNA gene sequence 
GGGCCTGTGGCTCAGTTGGTTAGAGCACTTCATTTGCAATGAAGGGGTCGGGAGTTCGAA
TCTCCCCAGGTCCACCG
Downstream region at tRNA end position 
ggcgttttgt
Secondary structure (Cloverleaf model)
>WENV170976765	Ala	TGC
                   t      ACCG ggcgttttgt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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