The detailed information of tRNA gene sequence


Sequence ID>WENV170976790
Genome IDMTKZ01012354
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2454
End posion on genome 2381
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cggaaacatc
tRNA gene sequence 
GGGGATGTAGCTTAGTTGGGAGAGCGCCGCCTTTGCACGGCGGAGGTCAGGGGTTCGAAT
CCCCTCATCTCCACtg
Downstream region at tRNA end position 
agctgcaaaa
Secondary structure (Cloverleaf model)
>WENV170976790	Ala	TGC
                   c      ACtg agctgcaaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       T T C G       A G G G G     C
    G       + | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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