The detailed information of tRNA gene sequence


Sequence ID>WENV170976795
Genome IDMTKZ01012369
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 18498
End posion on genome 18423
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgatggccgt
tRNA gene sequence 
AGGGCGGTAGCTCAATTGGTAGAGTAGCGGTCTCCAAAACCGTCGGTTGGGGGTTCGAGT
CCCTCCCGCCCTGCCA
Downstream region at tRNA end position 
agtgatggaa
Secondary structure (Cloverleaf model)
>WENV170976795	Trp	CCA
                   t      GCCA agtgatggaa
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     CGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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