The detailed information of tRNA gene sequence


Sequence ID>WENV170976825
Genome IDMTKZ01012627
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 192
End posion on genome 267
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gaataaataa
tRNA gene sequence 
GGGCCCATAGCGCAGTTGGGAGCGCGTCTCAATGGCATTGAGAAGGCCGAGAGTTCGAAT
CTCTCTGGGTCCACTA
Downstream region at tRNA end position 
aagacagccg
Secondary structure (Cloverleaf model)
>WENV170976825	Ala	GGC
                   a      ACTA aagacagccg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C T C T C     A
      T G A        A      | | | | |     G
    T       C G C G       G A G A G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGCC
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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