The detailed information of tRNA gene sequence


Sequence ID>WENV170976832
Genome IDMTKZ01012835
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2600
End posion on genome 2691
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agttaaaaat
tRNA gene sequence 
GGGGAGGTGCCAGAGTGGTTGAATGGGGCCGCCTGCTAAGTGGTTGTTGGGGTAAAACTC
AACCGGGGGTTCGAATCCCCCCTTCCCCGCAA
Downstream region at tRNA end position 
gataatccgc
Secondary structure (Cloverleaf model)
>WENV170976832	Ser	GCT
                   t      GCAA gataatccgc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G G G G G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     TGTTGGGGTAAAACTCAACC
                    G + T
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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