The detailed information of tRNA gene sequence


Sequence ID>WENV170976837
Genome IDMTKZ01012924
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1554
End posion on genome 1478
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttgtcagctt
tRNA gene sequence 
CGGGGCGTAGCGCAGCTTGGTAGCGCGCTTGGTTCGGGACCAAGAGGCCGCAGGTTCAAA
TCCTGTCGCCCCGACCA
Downstream region at tRNA end position 
tatattcacg
Secondary structure (Cloverleaf model)
>WENV170976837	Pro	CGG
                   t      ACCA tatattcacg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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