The detailed information of tRNA gene sequence


Sequence ID>WENV170976840
Genome IDMTKZ01012972
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2115
End posion on genome 2191
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
cttctgccgg
tRNA gene sequence 
GCGGGAGTAGCTCAGTTGGCTAGAGCATCAGCCTTCCAAGCTGAGGGTCGCGGGTTCGAA
GCCCGTCTCCCGCTCCA
Downstream region at tRNA end position 
ccatcgtctc
Secondary structure (Cloverleaf model)
>WENV170976840	Gly	TCC
                   g      TCCA ccatcgtctc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          G A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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