The detailed information of tRNA gene sequence


Sequence ID>WENV170976857
Genome IDMTKZ01013300
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1059
End posion on genome 969
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
acagttgttt
tRNA gene sequence
GGAGGGATACCGAAGTGGTCATAACGGGCTAGTCTCGAAAACTAAGCGTGATGAAAATCA
CCCGTGGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position
gtaaaaacca
Secondary structure (Cloverleaf model)
>WENV170976857	Ser	CGA
                   t      GCCA gtaaaaacca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     GCGTGATGAAAATCACCC
                    C   A
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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