The detailed information of tRNA gene sequence


Sequence ID>WENV170976864
Genome IDMTKZ01013470
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12830
End posion on genome 12735
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccttgggaat
tRNA gene sequence 
GGGAGTGGCTAGGTCCCGGTGGGTCTCCCGGTCTTCAAAACCGGTGGCGGGTCGCGTTGC
GGGCCGCGGTGGGTTCGACTCCCATCCATTCCCGCCt
Downstream region at tRNA end position 
cttccaacag
Secondary structure (Cloverleaf model)
>WENV170976864	SeC(p)	TCA
                   t      GCCt cttccaacag
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G - C          T C
                    C     T A C C C     A
      C C C        T      + | | | |     G
    G       T G G A       G T G G G     C
    G       + + | |                 T T
    T       G T C T
      G G          C     TGGCGGGTCGCGTTGCGGGCCGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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