The detailed information of tRNA gene sequence


Sequence ID>WENV170976867
Genome IDMTKZ01013570
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1205
End posion on genome 1131
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gcaattcatt
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGAAGTCACGGGTTCGAG
TCCCGTCAGCTCCACtt
Downstream region at tRNA end position 
cagtcgaggc
Secondary structure (Cloverleaf model)
>WENV170976867	Ala	TGC
                   t      ACtt cagtcgaggc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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