The detailed information of tRNA gene sequence


Sequence ID>WENV170976869
Genome IDMTKZ01013574
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 11955
End posion on genome 12031
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tggtgttcga
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTGCCCCCGCTCCCA
Downstream region at tRNA end position 
tgcctttaac
Secondary structure (Cloverleaf model)
>WENV170976869	Met	CAT
                   a      CCCA tgcctttaac
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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