The detailed information of tRNA gene sequence


Sequence ID>WENV170976881
Genome IDMTKZ01013685
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 8532
End posion on genome 8607
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttcgcgcgc
tRNA gene sequence 
AGGTCCGTGGCTCAATTGGCAGAGCACCGGTCTCCAAAACCGGGGGTTGCAGGTTCGAGT
CCTGCCGGGCCTGCCA
Downstream region at tRNA end position 
ttatattcac
Secondary structure (Cloverleaf model)
>WENV170976881	Trp	CCA
                   c      GCCA ttatattcac
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T G
                    T     C G T C C     A
      T A A        G      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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