The detailed information of tRNA gene sequence


Sequence ID>WENV170976883
Genome IDMTKZ01013720
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 11701
End posion on genome 11624
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gccgtgttgt
tRNA gene sequence 
CGGGGTGTAGCGCAGTCCGGTTAGCGCGCTTCGTTCGGGACGAAGAGGCCGGAGGTTCGA
ATCCTCTCACCCCGACCA
Downstream region at tRNA end position 
gtcctacttt
Secondary structure (Cloverleaf model)
>WENV170976883	Pro	CGG
                   t      ACCA gtcctacttt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C T G A        A      + | | | |     G
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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