The detailed information of tRNA gene sequence


Sequence ID>WENV170976888
Genome IDMTKZ01013796
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 467
End posion on genome 542
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
accttgatcc
tRNA gene sequence 
GGGGATGTAGCTCAGTTGGGAGAGCGCCGCCTTTGCACGGCGGAGGCCAGGAGTTCGAGC
CTCCTCATCTCCACAA
Downstream region at tRNA end position 
cgagcgacgg
Secondary structure (Cloverleaf model)
>WENV170976888	Ala	TGC
                   c      ACAA cgagcgacgg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          C G
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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