The detailed information of tRNA gene sequence


Sequence ID>WENV170976891
Genome IDMTKZ01013832
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3355
End posion on genome 3443
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcatttctgT
tRNA gene sequence 
GCTGAGGTAGTCTAGACCGGTAGGGCGCAGGCCTGGAAAGCCTGTGGGGCGTCCAGCCCC
TCGGGAGTTCAAATCTCCCCCTCAGCGTtc
Downstream region at tRNA end position 
tcatgatccg
Secondary structure (Cloverleaf model)
>WENV170976891	Ser	GGA
                   T      GTtc tcatgatccg
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      A G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       + | + |                 T T
    G       G G G C
      G T A        G     TGGGGCGTCCAGCCCCTC
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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