The detailed information of tRNA gene sequence


Sequence ID>WENV170976906
Genome IDMTKZ01013984
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1936
End posion on genome 1861
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cagcgtttaT
tRNA gene sequence 
AGGCGTGTAGCTCAATTGGCAGAGCACCGCTCTCCAAAAGCGGGGGTTGCGGGTTCAAGT
CCTGCCACGCCTGTCt
Downstream region at tRNA end position 
aaaatagtgt
Secondary structure (Cloverleaf model)
>WENV170976906	Trp	CCA
                   T      GTCt aaaatagtgt
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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