The detailed information of tRNA gene sequence


Sequence ID>WENV170976945
Genome IDMTKZ01014535
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1005
End posion on genome 930
Amino Acid Sup
Anticodon CTA
Upstream region at tRNA start position 
tagtgtgtat
tRNA gene sequence 
GCCCCAGTGAGCGAATGGTAGAGCTACCGGTCTCTAAAACCGGGTTTTGCGGGTTCGAGC
CCCGCCTGGGGTGCCA
Downstream region at tRNA end position 
ttttttatat
Secondary structure (Cloverleaf model)
>WENV170976945	Sup	CTA
                   t      GCCA ttttttatat
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          C G
                    T     C G C C C     A
      T A A        G      | | | | |     G
    G       G C G A       G C G G G     C
    G         | | |                 T T
    T       A G C T
      A G          A     GTTTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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