The detailed information of tRNA gene sequence


Sequence ID>WENV170976946
Genome IDMTKZ01014540
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6026
End posion on genome 5949
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
atcgttcccT
tRNA gene sequence 
GGGGGCGTAGCTCAGCTGGCTAGAGCAGTTGCTTTGCAAGCAACAGGCCGTGGGTTCGAG
TCCCATCGCCTCCACCC
Downstream region at tRNA end position 
cgtgatgtcg
Secondary structure (Cloverleaf model)
>WENV170976946	Ala	TGC
                   T      ACCC cgtgatgtcg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T A C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGCC
                    G - C
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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