The detailed information of tRNA gene sequence


Sequence ID>WENV170976948
Genome IDMTKZ01014609
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6684
End posion on genome 6610
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcgcagcgt
tRNA gene sequence 
GGCGGAGTAGCTCAGTTGGTCAGAGCACGCGGCTCATACCCGCGGCGTCGTCGGTTCAAG
TCCGACCTCCGCTACtt
Downstream region at tRNA end position 
ttcttcccct
Secondary structure (Cloverleaf model)
>WENV170976948	Met	CAT
                   t      ACtt ttcttcccct
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C A G C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GCGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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