The detailed information of tRNA gene sequence


Sequence ID>WENV170976957
Genome IDMTKZ01014807
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 102
End posion on genome 194
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gatctttcga
tRNA gene sequence 
GGAGAGGTGCTGGAGTGGCTGAACAGGGCTGCCTGCTAAGCAGTTGTACTCCGTCAAGGG
GTACCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
gataaacggc
Secondary structure (Cloverleaf model)
>WENV170976957	Ser	GCT
                   a      GCCA gataaacggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G T C       G G G G G     C
    G         | | |                 T T
    C       A C A G
      T G A        G     TGTACTCCGTCAAGGGGTACC
                    G + T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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