The detailed information of tRNA gene sequence


Sequence ID>WENV170976963
Genome IDMTKZ01014873
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 818
End posion on genome 723
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
agccttccgc
tRNA gene sequence 
GGAGGTGGAGGGGTCCTGGTGGGCCTCCTGGACTTCAAATCCAGCGCGGGGCGAACTTAA
GTCCCGGGTGGGTTCGATTCCCATGCACCTCCGCCA
Downstream region at tRNA end position 
ctattacccc
Secondary structure (Cloverleaf model)
>WENV170976963	SeC(p)	TCA
                   c      GCCA ctattacccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      T C C        G      + | | | |     G
    G       T G G G       G T G G G     C
    G       + | | +                 T T
    T       G C C T
      G G          C     CGCGGGGCGAACTTAAGTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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