The detailed information of tRNA gene sequence


Sequence ID>WENV170976989
Genome IDMTKZ01015385
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12377
End posion on genome 12468
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccgatattgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGACGGTCTCGAAAACCGTTATCTCGAGCGATTGG
GATCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
acgatgtccc
Secondary structure (Cloverleaf model)
>WENV170976989	Ser	CGA
                   c      GCCA acgatgtccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATCTCGAGCGATTGGGATC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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