The detailed information of tRNA gene sequence


Sequence ID>WENV170976995
Genome IDMTKZ01015510
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 939
End posion on genome 864
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaacgtaccc
tRNA gene sequence 
GGGGGCATAGCTCAGTTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGGGGTTCGACC
CCCCTTGTCTCCACCA
Downstream region at tRNA end position 
tcccttagcg
Secondary structure (Cloverleaf model)
>WENV170976995	Ala	TGC
                   c      ACCA tcccttagcg
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     C - G
                     A - T          C C
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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