The detailed information of tRNA gene sequence


Sequence ID>WENV170977004
Genome IDMTKZ01015627
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 8068
End posion on genome 8161
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatttatatt
tRNA gene sequence 
GGAGAGGTGCTAGAGTGGTCGAATAGGGCACACTCGAAATGTGTTATTCAGGTTTATTCC
TGGATCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gttaggaaat
Secondary structure (Cloverleaf model)
>WENV170977004	Ser	CGA
                   t      GCCA gttaggaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A T C       G T G G G     C
    G         | | |                 T T
    T       A T A G
      C G A        G     TATTCAGGTTTATTCCTGGATC
                    G + T
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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