The detailed information of tRNA gene sequence


Sequence ID>WENV170977020
Genome IDMTKZ01015786
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 316
End posion on genome 240
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taggtaattt
tRNA gene sequence 
GGTGGGATAGCTCAGTTGGTTAGAGCATGGGATTCATAAACCCAAGGTCGGTGGTTCGAT
CCCACCTCCCACTACCA
Downstream region at tRNA end position 
tttcatttta
Secondary structure (Cloverleaf model)
>WENV170977020	Met	CAT
                   t      ACCA tttcatttta
                     G + T
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          C T
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T - A
                    G - C
                    G - C
                    G - C
                    A   A
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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