The detailed information of tRNA gene sequence


Sequence ID>WENV170977021
Genome IDMTKZ01015799
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 11569
End posion on genome 11480
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgtcatcgac
tRNA gene sequence 
GGAGAGTTGCCAGAGCGGACGAATGGGACGGTCTCGAAAACCGTTGAATGCGCAAGCATT
CCAAGGGTTCGAATCCCTTACTCTCCGCCA
Downstream region at tRNA end position 
ctacacccct
Secondary structure (Cloverleaf model)
>WENV170977021	Ser	CGA
                   c      GCCA ctacacccct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T T C C C     A
      C G A        G      | | | | |     G
    G       G A C C       A A G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGAATGCGCAAGCATTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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