The detailed information of tRNA gene sequence


Sequence ID>WENV170977022
Genome IDMTKZ01015817
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 936
End posion on genome 862
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attggggaaT
tRNA gene sequence 
GCCCCTGTAGCTCAACGGGAAGAGTGCTGATCTGCTAAATCAAAGGTTGCGGGTTCAAAT
CCCGTCAGGGGCAAtc
Downstream region at tRNA end position 
atcgattaac
Secondary structure (Cloverleaf model)
>WENV170977022	Ser	GCT
                   T      AAtc atcgattaac
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T G C C C     A
      C A A        A      + | | | |     A
    G       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      A A          G     AGGTT
                    C   A
                    T - A
                    G - C
                    A - T
                    T - A
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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