The detailed information of tRNA gene sequence


Sequence ID>WENV170977023
Genome IDMTKZ01015827
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12472
End posion on genome 12565
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aataaaccgc
tRNA gene sequence 
GGAGAGATGTCTGAGTGGCCGAAGGAGCACGACTGGAAATCGTGTGTATGCCCACAAAGG
TGTACCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
gaatataatg
Secondary structure (Cloverleaf model)
>WENV170977023	Ser	GGA
                   c      GCCA gaatataatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G C G G G     C
    G         + | |                 T T
    C       A G G A
      C G A        G     TGTATGCCCACAAAGGTGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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