The detailed information of tRNA gene sequence


Sequence ID>WENV170977063
Genome IDMTKZ01016597
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 270
End posion on genome 194
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agaacgcatc
tRNA gene sequence 
GGGCGTATAGCTCAGCTGGTTAGAGCAGCCGACTCATAATCGGCCGGTCGCAGGTTCGAG
TCCTGCTGGGCCCACCA
Downstream region at tRNA end position 
cgttgtcatc
Secondary structure (Cloverleaf model)
>WENV170977063	Met	CAT
                   c      ACCA cgttgtcatc
                     G - C
                     G - C
                     G - C
                     C - G
                     G   G
                     T + G
                     A - T          T G
                    T     C G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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