The detailed information of tRNA gene sequence


Sequence ID>WENV170977083
Genome IDMTKZ01016747
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6416
End posion on genome 6342
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ccaaaatgtt
tRNA gene sequence 
CGGGAAGTAGCGCAGGCCGGTAGCGCACCTGGTTTGGGACCAGGGGGTCGCAGGTTCGAA
TCCTGTCTTCCCGACtt
Downstream region at tRNA end position 
actcagaaaa
Secondary structure (Cloverleaf model)
>WENV170977083	Pro	TGG
                   t      ACtt actcagaaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G T C C     A
      G G A        A      + | | | |     G
    C       C G C G       G C A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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