The detailed information of tRNA gene sequence


Sequence ID>WENV170977089
Genome IDMTKZ01016878
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 10611
End posion on genome 10535
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gaataagcaa
tRNA gene sequence 
GGCCCTGTAGCGCAGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGCCGGTTCAAG
TCCGGTCAGGGTCGCCG
Downstream region at tRNA end position 
agagggagcc
Secondary structure (Cloverleaf model)
>WENV170977089	Asp	GTC
                   a      GCCG agagggagcc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T G G C C     A
      T G A        A      + | | | |     A
    T       C G C G       G C C G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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