The detailed information of tRNA gene sequence


Sequence ID>WENV170977093
Genome IDMTKZ01016951
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 59643
End posion on genome 59719
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
acttagtgtt
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGCTAGAGCGCCTGCTTTGCATGCAGGAGGTCAAGGGTTCAAA
TCCCTTAAGGTCCACCA
Downstream region at tRNA end position 
tattgaatta
Secondary structure (Cloverleaf model)
>WENV170977093	Ala	TGC
                   t      ACCA tattgaatta
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     T - A          T A
                    T     T T C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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