The detailed information of tRNA gene sequence


Sequence ID>WENV170977113
Genome IDMTKZ01016999
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 72
End posion on genome 148
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tatttaaagc
tRNA gene sequence 
GGAGACGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCAAG
TCTCGTCGTCTCCGCCA
Downstream region at tRNA end position 
gtagtttgtg
Secondary structure (Cloverleaf model)
>WENV170977113	Asp	GTC
                   c      GCCA gtagtttgtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     A
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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